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Root optim #40

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nossleinad wants to merge 4 commits into MurrellGroup:main from nossleinad:root_optim

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nossleinad commented Oct 30, 2024

New (core?) algorithm: root_optim!
New felsenstein-related algorithm: felsenstein_roundtrip!
- This is the one which does the usual fel-up then fel-down with forward! = backward!
- I'm not totally happy about the name, I considered felsenstein_yoyo!. You have an aptitude for nomenclature @murrellb, any suggestions?

nossleinad added 4 commits

October 27, 2024 19:08


          Add felsenstein_roundtrip and root_optim

03b6aff


          Update docstring

d8393fc


          Make user-defined optimization more flexible

8e28265


          Make compat with 1.6

369ad62

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